Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAACCAACTCTCAGAATTCAGACTTCCTGCAGCTGCC
..(((((((((((((((....&))))))).......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021097
GeneSymbolSLC8A1
Binding site20529,20568
Score0.923
Seed1
Au0.618
Energy-21.8
Binding len39
Me-4.957
Phylopstem1.3018305631578952
Phylopflank1.8052788450000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure