Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCGGCAAGCTGCGC
.(((((((((.((((.(((((&))))))))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021098
GeneSymbolCACNA1H
Binding site2723,2744
Score0.846
Seed1
Au0.368
Energy-25.5
Binding len21
Me-6.851
Phylopstem1.4829259900000002
Phylopflank2.68399668625
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure