Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACACGCAGCCGCAGGCCGAGGGGGTGGGCGCTGCAC
.(((((((((((((((.((((&))))....)))))))))................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021098
GeneSymbolCACNA1H
Binding site1343,1383
Score0.846
Seed1
Au0.324
Energy-24.4
Binding len40
Me-3.793
Phylopstem0.23702918064516132
Phylopflank2.5216321975
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure