Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGCCGCCGCGAGCTGCGC
.((((((((((((.((..((.&)).)).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021098
GeneSymbolCACNA1H
Binding site1299,1319
Score0.981
Seed1
Au0.279
Energy-23.8
Binding len20
Me-4.65
Phylopstem1.1505341384615384
Phylopflank2.1487984725000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure