Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGTCTGCGGTTCCCGCAGATACAGCCGCTGCCCCGGAGGTGGGGCCAGTGCTGCGAC
(((((((.(((((((((....&.))))))))).....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021100
GeneSymbolNFS1
Binding site175,236
Score0.923
Seed1
Au0.412
Energy-21.3
Binding len39
Me-6.251
Phylopstem-0.12584292222222226
Phylopflank0.2942462062500001
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end4
PositionCDS
2D Structure