Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCGCGGCTGCT
..((((((((((.....((((&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330758
GeneSymbolSDHA
Binding site52,68
Score0.846
Seed1
Au0.25
Energy-20.5
Binding len16
Me-8.071
Phylopstem-0.7414377999999999
Phylopflank0.03587097625000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure