Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CAGTCAATGCCAGGTA
(((((((((.............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021101
GeneSymbolCLDN1
Binding site700,716
Score1.0
Seed1
Au0.515
Energy-16.2
Binding len11
Me-14.466
Phylopstem-0.0990124322222222
Phylopflank0.152929845375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure