Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCGCAGCTT
....((((((((((((.....&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021101
GeneSymbolCLDN1
Binding site22,35
Score0.846
Seed0
Au0.344
Energy-22.7
Binding len13
Me-9.547
Phylopstem0.7198646666666666
Phylopflank0.40818910499999994
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure