Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAACGCGGGGCTGCAGCTGTT
..((((((((((((((..(((&)))...)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021101
GeneSymbolCLDN1
Binding site243,266
Score0.949
Seed1
Au0.353
Energy-21.7
Binding len23
Me-4.957
Phylopstem0.02714582624999999
Phylopflank-0.06981550449999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure