Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTCCGGCTGACTTCTGAGAAGGTTGCGCAGCAGCTGTG
..((((((((.(.(((((...&.)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021105
GeneSymbolPLSCR1
Binding site4,46
Score0.846
Seed1
Au0.412
Energy-18.2
Binding len17
Me-9.071
Phylopstem-0.6871220000000001
Phylopflank-0.020084492499999988
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure