Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAATTTCTCCAAAAATGATGTGATGCTGAGTGCAGTTGTAAT
((((((((((((((((((((.&)))))))))..........................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365927
GeneSymbolNLGN1
Binding site2553,2600
Score0.846
Seed1
Au0.647
Energy-22.5
Binding len47
Me-3.938
Phylopstem3.849333297826088
Phylopflank3.6545270162499994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure