Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGATCAGGCTGCAAA
((((((((..((((((.....&)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365927
GeneSymbolNLGN1
Binding site1642,1658
Score0.974
Seed1
Au0.515
Energy-18.7
Binding len16
Me-6.236
Phylopstem5.8263029
Phylopflank5.517985915000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure