Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAAGCAGCCACCGCAGCAGCAGA
((((.(((((((((((..(((&)))...)))...)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021117
GeneSymbolCRY2
Binding site1835,1861
Score0.846
Seed0
Au0.382
Energy-22.7
Binding len26
Me-8.057
Phylopstem0.5998751357142857
Phylopflank0.7707909212499998
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure