Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCAGTCAATGCCC
....(((((....(((((((((&)))))))))....))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001365933
GeneSymbolNLGN1
Binding site642,661
Score0.846
Seed0
Au0.603
Energy-16.4
Binding len19
Me-18.25
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end8
Position5UTR
2D Structure