Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCAATGGCCACCCATTTACACAGCTGCCAGGG
.(((((((.....(((((((..&.)))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021118
GeneSymbolCYLC1
Binding site288,323
Score0.923
Seed1
Au0.574
Energy-18.1
Binding len20
Me-13.553
Phylopstem0.26675365714285715
Phylopflank0.8144743637499998
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure