Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGTGACCGCAGCTCGCGC
.(((((((((((((((((((.&.)))))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021135
GeneSymbolRPS6KA2
Binding site73,95
Score0.846
Seed1
Au0.191
Energy-25.5
Binding len22
Me-3.793
Phylopstem2.1975547499999992
Phylopflank1.57598458125
Longest consecutive pairings16
Position of longest consecutive pairings5
Pairings in 3prime end7
Position5UTR
2D Structure