Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCCAAGCAGCTGCGC
.(((((((((....(((((((&)))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021135
GeneSymbolRPS6KA2
Binding site1898,1918
Score0.923
Seed1
Au0.353
Energy-23.5
Binding len20
Me-12.111
Phylopstem-0.21542366666666665
Phylopflank-0.31883732500000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure