Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAAAACAGCTGTTTTTAGGCTGTT
..(((((((((((((((((((&)))))...)))))))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021136
GeneSymbolRTN1
Binding site2603,2631
Score1.0
Seed1
Au0.632
Energy-20.3
Binding len28
Me-4.957
Phylopstem2.245029974074074
Phylopflank1.9262738074999997
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure