Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAATTTCTCCAAAAATGATGTGATGCTGAGTGCAGTTGTAAT
((((((((((((((((((((.&)))))))))..........................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365933
GeneSymbolNLGN1
Binding site2493,2540
Score0.846
Seed1
Au0.647
Energy-22.5
Binding len47
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure