Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAGCCTGGCCAGCAGCTCAGA
(((.(((((((((((((((((&)))))))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021137
GeneSymbolTNFAIP1
Binding site1889,1916
Score1.0
Seed0
Au0.382
Energy-23.8
Binding len27
Me-6.97
Phylopstem0.320056347826087
Phylopflank0.12005228249999994
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure