Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGATTCCACGCCATCGGCTGCC
..(((((((.((((((((((.&)))))))........)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021138
GeneSymbolTRAF2
Binding site696,724
Score0.846
Seed1
Au0.412
Energy-21.5
Binding len28
Me-6.2
Phylopstem2.443271944444444
Phylopflank2.22450210925
Longest consecutive pairings7
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure