Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTCATGGCTGCAGCTAGCGT
.(((((((((((((((.((((&)).)).)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021138
GeneSymbolTRAF2
Binding site48,71
Score0.923
Seed1
Au0.338
Energy-21.5
Binding len23
Me-3.793
Phylopstem3.1811018812499996
Phylopflank1.5062701175000002
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end7
Position5UTR
2D Structure