Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAGCCACAGCTTGCT
..(((((((.((((((..(((&))).)))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021140
GeneSymbolKDM6A
Binding site1982,2002
Score0.846
Seed1
Au0.412
Energy-22.2
Binding len20
Me-6.2
Phylopstem3.6515325
Phylopflank3.5746512249999993
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure