Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCAGTGGCTTTGCTGCAC
.((((((.((.(((((.((((&)))).))))).))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021149
GeneSymbolCOTL1
Binding site1274,1297
Score1.0
Seed1
Au0.5
Energy-20.8
Binding len23
Me-8.932
Phylopstem5.770393333333334
Phylopflank4.235216515
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure