Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CATTGGAGGAGTGGTTTAAGAGTGCCAGGC
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021154
GeneSymbolPSAT1
Binding site1510,1540
Score0.846
Seed1
Au0.544
Energy-15.2
Binding len10
Me-14.322
Phylopstem-0.3851341125
Phylopflank-0.038421266250000016
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure