Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCGGCTGCAC
.((((((((((((........&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021155
GeneSymbolCD209
Binding site2246,2259
Score0.923
Seed1
Au0.309
Energy-21.4
Binding len13
Me-5.619
Phylopstem0.3134703816666667
Phylopflank0.08774171125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure