Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGCTGAAGGCTGCAGT
((((((((.((((((...(((&)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021155
GeneSymbolCD209
Binding site335,355
Score1.0
Seed1
Au0.441
Energy-20.4
Binding len20
Me-5.227
Phylopstem0.18439362499999998
Phylopflank-0.07817550000000001
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure