Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGGGCCCGGGTGGGCCCTGGAGGCCGTGGCTGCGC
.(((((((((((((...(((.&.)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021170
GeneSymbolHES4
Binding site747,787
Score0.846
Seed1
Au0.25
Energy-26.5
Binding len21
Me-4.762
Phylopstem1.6596299307692308
Phylopflank-0.0161510299999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure