Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACCTGCTGGGGCTGTGAG
((((((((.((((.(((((..&)))))..)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021174
GeneSymbolCCAR2
Binding site4718,4739
Score0.897
Seed1
Au0.368
Energy-22.4
Binding len21
Me-5.851
Phylopstem0.46738155
Phylopflank0.19491138124999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure