Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACTCAACCGCAAGACTTGTCCAAGCTCTGCTGTCAAC
(((((((((((((((...(((&)))...)))))))).................)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021179
GeneSymbolCCDC181
Binding site1091,1131
Score0.846
Seed1
Au0.515
Energy-20.1
Binding len40
Me-4.171
Phylopstem1.1575215181818181
Phylopflank1.7467945562500002
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end5
PositionCDS
2D Structure