Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCATTATAACTGAAAGTTTCTATTAAATATTTCAGTGGGCAGCTGCT
..(((((((((((((((((((&))).))))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021179
GeneSymbolCCDC181
Binding site1723,1771
Score0.923
Seed1
Au0.676
Energy-19.7
Binding len48
Me-4.957
Phylopstem1.0140978510638297
Phylopflank1.0187050787499996
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end8
PositionCDS
2D Structure