Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGCAGTGTGGTCCTGGCTGCCGCGGAGGCAGG
((((..(((((((.((.(((.&.))).)).)))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021179
GeneSymbolCCDC181
Binding site49,86
Score0.846
Seed0
Au0.368
Energy-23.7
Binding len22
Me-10.814
Phylopstem0.06175871428571429
Phylopflank0.659557555625
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure