Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAACCTGGGTTGCAGA
((((((((..(((((((((((&)))))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021183
GeneSymbolRAP2C
Binding site1283,1305
Score1.0
Seed1
Au0.559
Energy-26.1
Binding len22
Me-6.236
Phylopstem1.2689280909090908
Phylopflank1.9416583299999994
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure