Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTGTGGCTGCAC
.((((((((((((....((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021185
GeneSymbolCATSPERG
Binding site2122,2139
Score1.0
Seed1
Au0.382
Energy-22.0
Binding len17
Me-5.619
Phylopstem2.7237080000000002
Phylopflank1.9797393225000002
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure