Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTCTGACAATGGGCATGCAAAAAGGGGCAGCTGCAAT
((((((((((..(((((..((&.)).)))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021189
GeneSymbolCADM3
Binding site3215,3256
Score0.923
Seed1
Au0.426
Energy-21.0
Binding len26
Me-10.109
Phylopstem0.46068494000000015
Phylopflank0.7448110617249999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure