Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCT
..(((((((((((.((.....&.)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021190
GeneSymbolPTBP2
Binding site1005,1050
Score1.0
Seed1
Au0.382
Energy-23.6
Binding len16
Me-5.814
Phylopstem4.7223477272727274
Phylopflank4.819284496250002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure