Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACTTACCTTTGTGAGCGGCTGTAGG
((((((((((......(((((&.))))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021191
GeneSymbolNEUROD4
Binding site3294,3321
Score0.846
Seed1
Au0.544
Energy-20.7
Binding len22
Me-13.224
Phylopstem-0.47992805999999993
Phylopflank0.31236458624999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure