Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAACAAGACAGACTGTCCCCAAGAGTTCCTGCTGCTGCT
..(((((.(((((((((((((&)))))))))).........................))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021195
GeneSymbolCLDN6
Binding site1024,1069
Score0.846
Seed0
Au0.412
Energy-20.4
Binding len45
Me-7.271
Phylopstem1.5843122657894735
Phylopflank3.21821291375
Longest consecutive pairings10
Position of longest consecutive pairings35
Pairings in 3prime end8
Position3UTR
2D Structure