Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATCTCCTTCGCAGTGCAGC
(((((.((((((..((((((.&)))))).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021195
GeneSymbolCLDN6
Binding site18,41
Score0.923
Seed0
Au0.412
Energy-18.9
Binding len23
Me-7.985
Phylopstem1.2855586666666667
Phylopflank-0.12208617307500003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure