Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGACCTTCTGTGGGGTTTG
(((((((((((...(((((((&)))))))....))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_021198
GeneSymbolCTDSP1
Binding site2120,2143
Score0.923
Seed1
Au0.397
Energy-28.5
Binding len23
Me-9.43
Phylopstem-0.25546661818181815
Phylopflank-0.030561548750000007
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure