Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGGACCAGGCTGCGAG
((((((((..((((.(.....&).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021201
GeneSymbolMS4A7
Binding site112,128
Score0.923
Seed1
Au0.456
Energy-17.8
Binding len16
Me-6.972
Phylopstem-0.17036387499999997
Phylopflank-0.22473875250000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure