Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACAAAGTGAAGATAAGCAGTTGCAAC
((((((((((..((((((...&))))))...........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021211
GeneSymbolZBED5
Binding site680,708
Score0.923
Seed1
Au0.647
Energy-18.1
Binding len28
Me-10.109
Phylopstem1.7055633000000001
Phylopflank2.0112951425
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure