Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACTTCTGCGGCGCAGA
((((.(((((((..(((((((&)))))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021218
GeneSymbolINIP
Binding site2206,2227
Score1.0
Seed0
Au0.368
Energy-27.1
Binding len21
Me-10.203
Phylopstem0.7038142857142858
Phylopflank0.3605245212499999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure