Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTGCATTGGCATGCCAAGAGGA
.((((((((.(((((((((...&))).))))))..))))))...)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021219
GeneSymbolJAM2
Binding site3653,3677
Score0.846
Seed1
Au0.529
Energy-17.2
Binding len24
Me-5.036
Phylopstem0.4045113099999999
Phylopflank0.043763768749999994
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure