Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCGACCGAAATCAGAAGAAGCCTGCCAGCTGCGT
.((((((((((((((((((((&)))).))))))))..................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021224
GeneSymbolZNF462
Binding site3923,3963
Score1.0
Seed1
Au0.397
Energy-25.7
Binding len40
Me-3.793
Phylopstem3.666540102564103
Phylopflank3.8105230187500014
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure