Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGGGGCTGGTCACTGAGCTCAGGGCCGAGCTGTG
..((((((.((((((((((((&))))))))......................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021226
GeneSymbolARHGAP22
Binding site2068,2109
Score0.846
Seed1
Au0.353
Energy-22.3
Binding len41
Me-6.013
Phylopstem4.550979947058821
Phylopflank4.19964687125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure