Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGCGTGCAGCTGCT
..(((((((((..((.(((((&)))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021229
GeneSymbolNTN4
Binding site1122,1141
Score0.923
Seed1
Au0.456
Energy-23.0
Binding len19
Me-9.826
Phylopstem0.5965457888888889
Phylopflank1.149847795
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure