Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCTGCGGCTGCGGG
((((((((((((((((.....&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021231
GeneSymbolCACTIN
Binding site453,470
Score0.846
Seed1
Au0.294
Energy-26.6
Binding len17
Me-3.938
Phylopstem5.93144625
Phylopflank5.4189979500000005
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure