Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTGACCGCAGCAGCGC
.(((.(((((((((....(((&)))...))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021242
GeneSymbolMID1IP1
Binding site1814,1834
Score0.846
Seed0
Au0.338
Energy-22.1
Binding len20
Me-8.881
Phylopstem-0.2689352488888889
Phylopflank1.375921082
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end4
Position5UTR
2D Structure