Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCGGGGCGCGGCTGCT
..(((((((((.((....(((&)))....)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021248
GeneSymbolCDH22
Binding site3141,3161
Score0.846
Seed1
Au0.191
Energy-23.6
Binding len20
Me-9.272
Phylopstem1.0603186666666666
Phylopflank0.49347101499999985
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure